Bacterium-Host Genomics: BIOMI/PLPA 608

Lecturers: Alan Collmer, Steve Winans and David Schneider


Syllabus for Fall 2004

Bioinformatics Exercise for Fall 2004

Course Schedule
Date Topic Lecturer
10/25 Microbial genomics: How, what, why, where, and when Collmer
10/27 Tools and Resources: Sequenced-based methods for predicting the function of an unknown protein Schneider
11/1 Tools and Resources: Global analyses of gene expression and function - "omics" Collmer
11/3 Xylella and Xanthomonas Collmer
11/8 Horizontal gene transfer Winans
11/10 E. coli 0157:H7 and Erwinia carotovora subsp. atroseptica Collmer
11/15 Yersinia Winans
11/17 Ralstonia solanacearum Collmer
11/22 Rhizobiaceae Winans
11/24 Pseudomonas syringae and P. aeruginosa Collmer
11/29 Genome analysis reports and discussion Collmer and Winans
12/1 Review and discussion of major lessons Collmer and Winans